Projects
CDB-REU research project opportunities and faculty research interests:
Faculty | Research Topics |
Anthony Darrouzet-Nardi | Plant ecophysiology and soil biogeochemistry in the context of global change |
Eli Greenbaum | Herpetology and Molecular Systematics |
Jerry D. Johnson | Ecology and ecogeography of snakes, lizards, and birds |
Camilo Khatchikian |
Ecological Adaptation of Desert Mosquitoes |
Philip Lavretsky |
Filling important knowledge gaps in the ecology of the Mexican duck |
Dr. Kelly S Ramirez | Assistant Professor, Biological Sciences |
Vanessa L. Lougheed | Aquatic ecology, ecological roles of ephemeral water bodies at IMRS |
Vicente Mata-Silva | Assistant Professor, Biological Sciences |
Jennie McLaren | Plant community and ecosystem ecology. |
Michael L. Moody | Dr. Moody’s research focuses on the evolution, distribution, and molecular ecology of invasive and rare endemic plants. |
Elizabeth J. Walsh | Evolution and ecology of freshwater invertebrates |
Anthony Darrouzet-Nardi
Assistant Professor, Biological Sciences
Proposed Projects:
Research in the Darrouzet-Nardi lab primarily focuses on exploring plant ecophysiology and soil biogeochemistry in the context of global change factors such as climate change and nitrogen deposition. REU students will conduct projects at the Jornada Experimental Range, in the northern Chihuahuan desert near Las Cruces, New Mexico (http://jornada-www.nmsu.edu/). Depending on student interests, projects will involve a combination of field sampling, as well as laboratory incubations and experiments. Potential projects include (1) Quantifying carbon storage and partitioning carbon cycling processes among key organisms in the ecosystem: plants, soil microbes, and biological soil crusts. (2) Testing the “fungal loop hypothesis” which suggests that soil fungi are key controllers of element cycling in dryland soils. Students will learn skills in measuring plant ecophysiological parameters such as photosynthesis, both field and lab techniques for analyzing soil chemistry and quantifying microbial biomass as well as other ecosystem properties, and statistical methods for analyzing data. Students will work in close collaboration with Dr. Jennie McLaren and her research group.
Eli Greenbaum
Associate Professor, Biological Sciences
Proposed Projects:
Dr. Greenbaum proposes a summer training project for students to learn and utilize methods in evolutionary genetics, including DNA extraction, DNA purification, DNA sequencing, and analysis of data generated in his lab from blood samples collected from reptiles on IMRS or adjacent areas. This will include a wet-lab component to understand the importance of collections, reading of primary literature, critical thinking and 20-minute presentations about conservation.
Jerry D. Johnson
Professor, Biological Sciences
Dr. Johnson’s research program is focused on population/community ecology of selected species of lizards and snakes using mark-recapture techniques associated with pit-fall trap arrays and radiotelemetry technology, as well as using photographic surveys and plant community analysis for an ecogeographic study of bird communities comparing permanent and ephemeral water sources.
Significance of the work:
Research questions:
Specifically, our research will address the following questions:
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What are the ecological parameters relating to lizard home ranges, habitat preferences, growth, reproduction, longevity, and symbiosis with other species determined by mark-recapture data gathered from pit-fall trap arrays?
- What are the ecological parameters relating to snake home ranges, movement patterns within home ranges, habitat and microhabitat preferences, reproduction, and symbiotic relationships with other species determined by data gathered using radiotelemetry?
- How do differences in habitat types affect the distribution of bird species between permanent and ephemeral water sources?
Methods to be learned:
Philip Lavretsky
Assistant Professor, Biology
Very little is known about the Mexican duck, which is endemic to North America. The Mexican duck ranges from Pueblo, Mexico through the highlands of Mexico and into southern New Mexico. Although estimated around 55,000 individuals, they remain a conservation concern due to habitat loss along with interspecific competition with a sister species, the mallard. The focus of the project will be to fill in important gaps in nesting ecology and habitat use of Mexican ducks. Specifically, potential REU students will work in several wetland areas around the greater El Paso region to find and track breeding females and nest success. Students will also be exposed to collection methods and collecting of wild Mexican ducks and mallards in order to the band, take morphological and phenotypic measurements and obtain blood for genetic analyses. Students will obtain experience working with wild birds, an understanding of and contribution to the ecology of a poorly understood species, and the importance of collected banding and genetic data in regards to conservation, in general.
Camilo Khatchikian
Assistant Professor, Biology
Proposed projects:
Females of desertic species of Aedes mosquitoes lay their eggs in crevices and depressions that are filled with water after a rainfall and where the larvae develop. Larval development time varies from weeks to months, depending on temperature, habitat quality, resources, and larval density. The larva, in contrast with the relatively durable egg, is not able to survive if the habitat dries out due to drought conditions. However, in some species, not all eggs hatch at the same time but hatch progressively after subsequent hatch stimuli inundations. This effectively scatters the egg cohort though time and has been suggested as an evolutionary response to biological factors (such as competition) and physical factors (such as desiccation), or more generally, as an adaptation to unpredictable environmental conditions. In such a context, it has been proposed that the group has a “bet-hedging” (do not put all your eggs in one basket) strategy that reduces the risk that a rapid drying up of the larval habitat terminates all of the reproductive efforts of the season. Interesting work has been done analyzing various ecological responses of mosquitoes adapted to template climates, but much ecological work is lacking to understand the life history strategies that allow desert mosquitoes to survive in such a hostile environment.
The project intends to assess the taxonomic identity, phenology, and responses to environmental conditions of local mosquitoes existing in the IMRS. The work will involve an initial survey of breeding habitats and the subsequent deployment of traps to collect adults and eggs at selected locations. Samples will be taken to Dr. Khatchikian’s laboratory at UTEP, where they will be examined, including species’ identification and hatching response over time among other variables. The student will learn how to manipulate properly the samples, and how to collect and analyze the data using a variety of statistical approaches. The student will have the opportunity to present the data at students and/or professional scientific events. The data collected in this project will certainly be included in the future scientific report(s).
Dr. Kelly S Ramirez
Assistant Professor, Biological Sciences
Proposed Projects:
This research project will be a major step towards understanding more precisely the soil taxa and soil community types involved in carbon storage. Soils contain an immense amount of biodiversity that supports terrestrial ecosystems and benefits humans worldwide. Yet, soil biodiversity is threatened by major changes in land-use, and by an increased incidence of extreme weather events as a result of current climate change. This is worrying because soils support the terrestrial carbon cycle by carbon sequestration, which is pivotal for climate regulation. The overall balance of carbon in soils is controlled by the interactive effects of climate, vegetation composition, and soil biodiversity, but this sensitive balance is threatened by soil biodiversity degradation as a result of intensified drought. A more complete assessment of soil biodiversity responses to climate change is needed to predict responses and identify potential management options to conserve soil biodiversity and soil services. Using a combination of long-term field experimentation and global scale soil biodiversity assessment this project will quantify and map local and regional patterns of soil biodiversity and carbon storage in connection with soil health under extreme drought events brought on by climate change. Specifically, the student will use DNA based analyses to examine soil biodiversity and its functional potential combined with measurements of microbial activity and carbon turnover. The outcomes of this project will facilitate the transfer of ecological research for informing on ways to enhance the stability of soil systems (for both biodiversity and carbon storage) under climate change and land degradation. The research project will culminate in the presentation of a poster at the end of the program and potential co-authorship on a research paper that will come from the findings.
Vanessa L. Lougheed
Associate Professor, Biological Sciences
Dr. Lougheed is head of UTEP’s Aquatic Ecology Lab and PI of the Biology Green Roof. Research in my lab focuses on nutrient cycling (N, P, C); bioindicator development using plants, invertebrates, and algae; and the use of remote sensing in monitoring ecosystem change.
Project Description:
My research utilizes interdisciplinary approaches to improve understanding of the causes and consequences of ecosystem change, degradation, and restoration. Two main projects are available for REU students:
1) Examining ecological restoration at the Rio Bosque Wetlands Park, which is a wetland restoration project owned and managed by UTEP. This is a rare desert wetland that creates a unique environment for aquatic organisms in the Chihuahuan Desert within the city of El Paso, TX. Starting in 2016, water availability has become more permanent in the park, with water present during the summer months for the first time in over a decade, creating a unique research opportunity. REU students will examine water quality, aquatic macroinvertebrates and/or wetland plant communities in different sites and how they have changed over time in response to the restoration. Students could use Geographic Information Systems (GIS), if interested.
2) Tracking plant structure and function on the UTEP Green Roof. The UTEP Green Roof was created as a platform for both research and education in 2009 and reopened in 2016 (after repairs). Students can look at the growth and success of native plant species, how these can be tracked using automated technologies, and how Green Roofs can mitigate the effects of climate change through carbon uptake.
Jennie Mc Laren
Assistant Professor, Biological Sciences
Dr. McLaren's research focuses on the effects of vegetation communities on ecosystem properties using techniques from both community and ecosystem ecology. Projects include identifying relationships between desert plant community composition and ecosystem functioning. Please see further description of research interests at www.jenniemclaren.com
Proposed Projects:
Research in my lab primarily focuses on exploring how changes in plant community structure influence the way that ecosystems work. Depending on student interests, projects will involve a combination of field sampling, as well as laboratory incubations and experiments. Students will learn skills in field plant survey techniques, both field and lab techniques for sampling soil chemistry and microbial activity and other ecosystem properties, and statistical methods for analyzing data.
Potential projects will focus on the effects of woody plants in controlling soil carbon processes in the Chihuahuan Desert. There has been a dramatic increase in the cover and abundance of woody plants in numerous ecosystems worldwide, including arctic tundra, grasslands, and desert ecosystems. “Restore New Mexico” is a large scale woody plant removal in New Mexico, being maintained by the USDA and BLM, with the ultimate goal of restoring desert grasslands. Students will examine the influence of woody shrub removal on nutrient cycling and microbial processes in soils in these Chihuahuan desert ecosystems, focusing on impacts on C-cycling.
Vicente Mata-Silva
Assistant Professor, Biological Sciences
Dr. Mata-Silva is acting co-director of IMRS. His research focuses on ecology, conservation, natural history, and geographic distribution of amphibians and reptiles from the Northern CD, Mexico and Central America. He will mentor students working on ecological aspects of either snake or lizard communities performing field research techniques and analyses at IMRS.
Michael Moody
Assistant Professor, Biology
Dr. Moody’s research focuses on the evolution, distribution, and molecular ecology of invasive and rare endemic plants. The research topics available to REU students are the systematics, conservation genetic, plant DNA fingerprinting or population genetic techniques in desert ecosystems and population genetics of invasive plant species.
Projects-: The Chihuahuan Desert flora still holds some mysteries regarding species identification and distributions. A project will be to choose a group of plants, rare species or poorly known invasive and use molecular and field-based methods to gain a better understanding of the plants of choice in Chihuahuan desert flora. These projects will help students learn skills in field survey techniques, the use of scientific collections and literature, genetic analyses, and statistical methods for analyzing data. The idea of the project is to have students develop skills in the design and completion of a research project during the summer.